Wachten laboratory

Project details

We generate open-source software tools as plug-ins in ImageJ to facilitate image analysis.

This project is headed by Jan Niklas Hansen.

https://github.com/hansenjn/CiliaQ

https://github.com/hansenjn/SpermQ

https://github.com/hansenjn/MultifocalImaging-AnalysisToolbox

Project-related publications

CiliaQ: a simple, open-source software for automated quantification of ciliary morphology and fluorescence in 2D, 3D, and 4D images

Hansen JN, Rassmann S, Stüven B, Jurisch-Yaksi N, Wachten D.

Eur Phys J E Soft Matter. 2021 Mar 8;44(2):18. doi: 10.1140/epje/s10189-021-00031-y.

SpermQ⁻A Simple Analysis Software to Comprehensively Study Flagellar Beating and Sperm Steering

Hansen JN, Rassmann S, Jikeli JF, Wachten D.

Cells. 2018 Dec 26;8(1):10. doi: 10.3390/cells8010010.

Project-related funding

SPP 1726

DFG

Boehringer Ingelheim Fonds

Boehringer Ingelheim Fonds

Project-related scientists

Dagmar Wachten Lab
Dagmar Wachten Lab
Dagmar Wachten Lab

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